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Wrapper function to pull all species catch and biological data from the NWFSC data wharehouse.

pull_wcgbts.Rd

Wrapper function to pull all species catch and biological data from the NWFSC data wharehouse.

Usage

pull_wcgbts(
  dir = dir,
  species,
  survey = "NWFSC.Combo",
  load = TRUE,
  convert = TRUE,
  verbose = FALSE
)

Arguments

dir

Directory location to save the cleaned data frame

species

A list of species names created by the get_species_list function

survey

A character entry from one of the following options that specifies which survey to pull the data for:

  • Triennial,

  • AFSC.Slope,

  • NWFSC.Combo,

  • NWFSC.Slope,

  • NWFSC.Shelf

load

Option to load in existing Rdata files with the catch and biological data.

convert

A logical as to whether to convert the data column names to the old names as currently used in the nwfscSurvey processing code

verbose

A logical value specifying whether or not to print out message statements to the screen while using this function. The default is to print all messages, i.e., verbose = TRUE.

Author

Chantel Wetzel